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jcore-pubmed-db-reader

An instantiation of the jcore-db-reader that uses the jcore-xml-mapper to retrieve and parse PubMed XML from a PostgreSQL database. The XML format of retrieved documents is expected to follow the PubMed/MEDLINE XML schema that was used beginning from 2017. I.e. the root document of a document must be PubmedArticle and not, as it was for MEDLINE until 2017, MedlineCitation.
https://github.com/JULIELab/jcore-projects/tree/master/jcore-pubmed-db-reader
JULIE Lab, Germany
medlinecitation medline root mapper pubmed jcore from postgresql used must until instantiation schema document parse retrieved follow 2017 beginning documents pubmedarticle format database that expected reader retrieve uses
文件下载
文件名 操作
jcore-pubmed-db-reader-2.3.10.jar 下载
jcore-pubmed-db-reader-2.3.10.pom 下载
jcore-pubmed-db-reader-2.3.10-sources.jar 下载
Apache Maven 
<dependency>
  <groupId>de.julielab</groupId>
  <artifactId>jcore-pubmed-db-reader</artifactId>
  <version>2.3.10</version>
</dependency>
Gradle Groovy 
implementation 'de.julielab:jcore-pubmed-db-reader:2.3.10'
Gradle Kotlin 
implementation("de.julielab:jcore-pubmed-db-reader:2.3.10")
Scala SBT 
libraryDependencies += "de.julielab" % "jcore-pubmed-db-reader" % "2.3.10"
Groovy Grape 
@Grapes(
  @Grab(group='de.julielab', module='jcore-pubmed-db-reader', version='2.3.10')
)
Apache Ivy 
<dependency org="de.julielab" name="jcore-pubmed-db-reader" rev="2.3.10" />
Leiningen 
[de.julielab/jcore-pubmed-db-reader "2.3.10"]
Apache Buildr 
'de.julielab:jcore-pubmed-db-reader:jar:2.3.10'
本项目依赖 
<parent>
  <groupId>de.julielab</groupId>
  <artifactId>jcore-projects</artifactId>
  <version>2.3.10</version>
</parent>

compile

|-- de.julielab:jcore-xml-db-reader:2.3.10

|-- de.julielab:jcore-descriptor-creator

|-- junit:junit